CDS

Accession Number TCMCG007C52821
gbkey CDS
Protein Id XP_009112417.1
Location complement(join(6214683..6214831,6214922..6215005,6215199..6215230,6215547..6215602,6215752..6215865,6215945..6216186,6216416..6217111,6217197..6217446))
Gene LOC103837794
GeneID 103837794
Organism Brassica rapa

Protein

Length 540aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009114169.3
Definition ubiquitin domain-containing protein DSK2b isoform X4 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category O
Description Ubiquitin domain-containing protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03051        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K04523        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04141        [VIEW IN KEGG]
map04141        [VIEW IN KEGG]
GOs GO:0000045        [VIEW IN EMBL-EBI]
GO:0001666        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005776        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006511        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006914        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007033        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009894        [VIEW IN EMBL-EBI]
GO:0009896        [VIEW IN EMBL-EBI]
GO:0009966        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010243        [VIEW IN EMBL-EBI]
GO:0010498        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0010941        [VIEW IN EMBL-EBI]
GO:0010959        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016234        [VIEW IN EMBL-EBI]
GO:0016235        [VIEW IN EMBL-EBI]
GO:0016236        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0019900        [VIEW IN EMBL-EBI]
GO:0019941        [VIEW IN EMBL-EBI]
GO:0022411        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0022898        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0030162        [VIEW IN EMBL-EBI]
GO:0030163        [VIEW IN EMBL-EBI]
GO:0030433        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031329        [VIEW IN EMBL-EBI]
GO:0031331        [VIEW IN EMBL-EBI]
GO:0031396        [VIEW IN EMBL-EBI]
GO:0031398        [VIEW IN EMBL-EBI]
GO:0031399        [VIEW IN EMBL-EBI]
GO:0031401        [VIEW IN EMBL-EBI]
GO:0031593        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032270        [VIEW IN EMBL-EBI]
GO:0032409        [VIEW IN EMBL-EBI]
GO:0032410        [VIEW IN EMBL-EBI]
GO:0032412        [VIEW IN EMBL-EBI]
GO:0032413        [VIEW IN EMBL-EBI]
GO:0032434        [VIEW IN EMBL-EBI]
GO:0032436        [VIEW IN EMBL-EBI]
GO:0032879        [VIEW IN EMBL-EBI]
GO:0032984        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034762        [VIEW IN EMBL-EBI]
GO:0034763        [VIEW IN EMBL-EBI]
GO:0034765        [VIEW IN EMBL-EBI]
GO:0034766        [VIEW IN EMBL-EBI]
GO:0034976        [VIEW IN EMBL-EBI]
GO:0035973        [VIEW IN EMBL-EBI]
GO:0036293        [VIEW IN EMBL-EBI]
GO:0036294        [VIEW IN EMBL-EBI]
GO:0036503        [VIEW IN EMBL-EBI]
GO:0042176        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0042981        [VIEW IN EMBL-EBI]
GO:0043067        [VIEW IN EMBL-EBI]
GO:0043161        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043269        [VIEW IN EMBL-EBI]
GO:0043271        [VIEW IN EMBL-EBI]
GO:0043632        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044092        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044257        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045732        [VIEW IN EMBL-EBI]
GO:0045862        [VIEW IN EMBL-EBI]
GO:0048471        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048584        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051049        [VIEW IN EMBL-EBI]
GO:0051051        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051247        [VIEW IN EMBL-EBI]
GO:0051603        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0051924        [VIEW IN EMBL-EBI]
GO:0051926        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061136        [VIEW IN EMBL-EBI]
GO:0061912        [VIEW IN EMBL-EBI]
GO:0061919        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065009        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070482        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0070925        [VIEW IN EMBL-EBI]
GO:0071453        [VIEW IN EMBL-EBI]
GO:0071456        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0080135        [VIEW IN EMBL-EBI]
GO:0097352        [VIEW IN EMBL-EBI]
GO:0140030        [VIEW IN EMBL-EBI]
GO:1900407        [VIEW IN EMBL-EBI]
GO:1901019        [VIEW IN EMBL-EBI]
GO:1901020        [VIEW IN EMBL-EBI]
GO:1901339        [VIEW IN EMBL-EBI]
GO:1901340        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901565        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1901698        [VIEW IN EMBL-EBI]
GO:1901800        [VIEW IN EMBL-EBI]
GO:1902175        [VIEW IN EMBL-EBI]
GO:1902531        [VIEW IN EMBL-EBI]
GO:1902882        [VIEW IN EMBL-EBI]
GO:1903050        [VIEW IN EMBL-EBI]
GO:1903052        [VIEW IN EMBL-EBI]
GO:1903069        [VIEW IN EMBL-EBI]
GO:1903071        [VIEW IN EMBL-EBI]
GO:1903169        [VIEW IN EMBL-EBI]
GO:1903170        [VIEW IN EMBL-EBI]
GO:1903201        [VIEW IN EMBL-EBI]
GO:1903320        [VIEW IN EMBL-EBI]
GO:1903322        [VIEW IN EMBL-EBI]
GO:1903362        [VIEW IN EMBL-EBI]
GO:1903364        [VIEW IN EMBL-EBI]
GO:1904062        [VIEW IN EMBL-EBI]
GO:1904063        [VIEW IN EMBL-EBI]
GO:1904292        [VIEW IN EMBL-EBI]
GO:1904294        [VIEW IN EMBL-EBI]
GO:1905037        [VIEW IN EMBL-EBI]
GO:1905897        [VIEW IN EMBL-EBI]
GO:1905898        [VIEW IN EMBL-EBI]
GO:2000058        [VIEW IN EMBL-EBI]
GO:2000060        [VIEW IN EMBL-EBI]
GO:2001233        [VIEW IN EMBL-EBI]
GO:2001242        [VIEW IN EMBL-EBI]
GO:2001257        [VIEW IN EMBL-EBI]
GO:2001258        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGTGGAGAAGGAGATTCGAGTAAGCCGCTGACCGCTGATGATGGTGGCGAAGGAGAAGGACGAGCTCTGGTGGCCGTCAACGTCAGATGCTCTAACGGATCCAAATTTAACGTGAGCACGAGCCTCGATTCCACGGTGGAAGCCTTCAAAGAGCTGGTGGCGCAGAACAGCGACGTCCCAGCGAATCAGCAGCGGTTGATTTACAAAGGTCGCATCCTCAAGGACGATCAAACTCTTCTCAGCTACGGTTTGCAGGCTGATCACACTGTTCATATGGTTCGAGGCTTCGCGCCATCTTCAGCACCACCTCCTTCTGCTCCTGTTAACCAAACCACTGATAATACCTCGAATCTTGGAGAATCTTTGTTTGGATTCAACCCTTTGGGCGGTGGGAGCTTATTCGGAGCACCACCGGATCTCGAGCAGGCTCAGCAGCAGCTAGCTCAGAACCCTAACATGGTTAGAGACATGATGAACTCCCCAGCCATCCAGAATCTTATGAACAACCCCGAGTTCATGAGGAGTATTATCATGAGCAACCCTCAGATGCGTGACCTTGTTGACCGCAACCCTGAGCTTGGCCACGTGCTTAATGACCCTAGCATCCTCAGGCAGACTTTGGAAGCTGCGAGGAACCCGGAGCTGATGCGTGAGATGATGCGGAATACCGATAGGGCCATGAGTAATATTGAGTCTATGCCTGAGGGGTTTAACCATCTTAGGCGTATGTATGAGAATGTTCAGGAGCCGCTCATGAATGCTACTACTATGTCCGGGAACGCTGGGAGCAATGCGGCTTCTAATCCTTTTGCTGCTCTCCTTGGAAACCAGGGGGTTACTACTACTACACAAGGTAGCGATGGTTCTACTAATGCTGAAACGGGGACAGGAAATGGTATTCCGAATGCAAACCCACTTCCTAATCCTTGGGGTGCTACTGCTGGACAGACAAACGCCCCAGGAAGGACAAATCCTGGTGGGGATGCGAGAAGCCCTGGACTTGGTGGTCTTGGTGGTCTAGGAGGACTTGGTGGGCTTGGAGGCCTTGGTGGACTGGGTATGCTTGGAGCGGATTCACCTCTTGGTGCCACTCCAGATGCTTCTCAGTTGAACCAGATGTTGCAAAATCCAGCCATGTCCCAGATGATGCAAAGCATGCTTTCCAATCCACAATACGTGAACCAGCTTATCAATCTCAACCCACAGCTCCGAAGTATGCTTGATTCGCATCCTCAGTTGAGGGAAATGATGCAGAACCCAGATCTCCTTCGTCAATTTAGCTCCCCGGAGATGATGCAGCAAATGATGTCTCTACAGCAATTACTTTCCTCCCAGAATAGAAATACGACCAGCCAGGAACCAGGGCAAACTGGTGCTGCTGCCGCAGGAAATAACGGAGGGATGGATTTATTGATGAATCTGTTTGGCAGTCTTGGTGCTGGTGGCCTTAGTGGCACAAACCAATCCAGTGTTCCTCCTGAGGAACGCTTTGCGACTCAGTTGCAGCAGCTACAAGAAATGGGATTCTATGACAGCGCAGAGAACATAAGGGCTTTGCTTGCAACCAATGGAAACGTTAACGCTGCTGTAGAACGGCTCTTGGGAAGTATTGGCCAGTAG
Protein:  
MGGEGDSSKPLTADDGGEGEGRALVAVNVRCSNGSKFNVSTSLDSTVEAFKELVAQNSDVPANQQRLIYKGRILKDDQTLLSYGLQADHTVHMVRGFAPSSAPPPSAPVNQTTDNTSNLGESLFGFNPLGGGSLFGAPPDLEQAQQQLAQNPNMVRDMMNSPAIQNLMNNPEFMRSIIMSNPQMRDLVDRNPELGHVLNDPSILRQTLEAARNPELMREMMRNTDRAMSNIESMPEGFNHLRRMYENVQEPLMNATTMSGNAGSNAASNPFAALLGNQGVTTTTQGSDGSTNAETGTGNGIPNANPLPNPWGATAGQTNAPGRTNPGGDARSPGLGGLGGLGGLGGLGGLGGLGMLGADSPLGATPDASQLNQMLQNPAMSQMMQSMLSNPQYVNQLINLNPQLRSMLDSHPQLREMMQNPDLLRQFSSPEMMQQMMSLQQLLSSQNRNTTSQEPGQTGAAAAGNNGGMDLLMNLFGSLGAGGLSGTNQSSVPPEERFATQLQQLQEMGFYDSAENIRALLATNGNVNAAVERLLGSIGQ